Plant Genotyping Equipment Market - Global Industry Size, Share, Trends, Opportunity, and Forecast, 2018-2028 Segmented By Equipment (SNP Genotyping Equipment, DNA Analyzer, Real Time PCR Instrument, Liquid Handler, Others), By Application (Quality Assessment, Product Development, Breeding, Plant Research, Others), By Region and Competition 2021-2031F

Forecast Period	2027-2031
Market Size (2025)	USD 805.41 Million
CAGR (2026-2031)	7.18%
Fastest Growing Segment	SNP Genotyping Equipment
Largest Market	North America
Market Size (2031)	USD 1220.95 Million

Market Overview

The Global Plant Genotyping Equipment Market will grow from USD 805.41 Million in 2025 to USD 1220.95 Million by 2031 at a 7.18% CAGR. Plant genotyping equipment comprises specialized instruments, including PCR systems and DNA sequencers, utilized to analyze genetic variations within plant species. The Global Plant Genotyping Equipment Market is primarily driven by the escalating demand for food security and the necessity to develop climate-resilient crops, which requires precise genetic characterization. Furthermore, the agricultural sector's focus on shortening breeding cycles fuels investment in genomic research. According to the International Seed Federation, in 2024, approximately 91% of surveyed sector experts anticipated that new breeding breakthroughs would accelerate the development of improved crop varieties, highlighting the critical reliance on these analytical tools.

Conversely, a significant challenge impeding market expansion is the substantial capital investment required for high-throughput infrastructure. The high costs associated with acquiring instrumentation, coupled with expenses for data management, create entry barriers for smaller research entities. Consequently, these financial constraints, along with a shortage of personnel skilled in interpreting complex genomic data, may restrict the widespread adoption of genotyping technologies in price-sensitive regions.

Key Market Drivers

The rising necessity for climate-resilient and disease-resistant varieties acts as a primary catalyst for the Global Plant Genotyping Equipment Market. As extreme weather events and shifting pest patterns threaten agricultural productivity, breeders are increasingly reliant on high-throughput genotyping to identify specific alleles responsible for drought tolerance and pathogen resistance. This urgency forces research institutions to upgrade their genomic infrastructure to accelerate variety development and screen vast germplasm libraries. For instance, according to the United States Department of Agriculture (USDA), July 2024, in the 'Plant Breeding for Agricultural Production' announcement, the agency invested $8.6 million specifically into breeding research to improve crop productivity and develop traits resilient to climate change. Such funding directly translates into procurement orders for the advanced PCR systems and sequencers required to execute these complex breeding programs.

A simultaneous surge in private sector investments in agri-biotech and seed development further propels market growth by providing the capital necessary for large-scale genomic projects. Major seed companies are aggressively expanding their budgets to integrate molecular markers and genomic selection into their pipelines, thereby driving the consumption of genotyping consumables and instruments. According to Corteva Agriscience, January 2024, in the 'Fourth Quarter and Full-Year 2023 Results' report, the company's annual research and development expenses reached $1.337 billion, reflecting a sustained commitment to innovation in seed technologies. This high-level corporate spending flows down to equipment providers, evidenced by the strong financial performance of key technology developers. According to Pacific Biosciences, in 2024, the company reported that its full-year revenue for 2023 grew by 56% to $200.5 million, largely driven by the adoption of new sequencing systems critical for resolving complex plant genomes.

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Key Market Challenges

The substantial capital investment required for high-throughput infrastructure stands as a primary obstacle restricting the expansion of the Global Plant Genotyping Equipment Market. Procurement of advanced instrumentation, such as next-generation DNA sequencers and automated PCR systems, demands heavy upfront expenditure that disproportionately impacts small-to-medium enterprises and publicly funded research stations. These financial requirements create significant entry barriers, effectively consolidating advanced genomic capabilities within a limited circle of well-funded multinational corporations while forcing smaller entities to rely on less efficient, traditional breeding methods.

This financial burden extends beyond hardware to include the high operational costs associated with data management and analysis. The complexity of interpreting vast genomic datasets requires expensive software and specialized personnel, resources that are often scarce in price-sensitive regions. This funding gap directly impedes technology adoption in developing agricultural economies where modernization is most critical. According to the International Seed Federation, in 2024, approximately one-third of global seed sector respondents identified the urgent need for increased private and public investment as the critical factor to unlock further innovation, confirming that current financial limitations act as a severe brake on market progress.

Key Market Trends

The Application of Artificial Intelligence for Real-Time Genotyping Data Interpretation is fundamentally reshaping breeding pipelines by decoupling genetic discovery from the time constraints of biological growing seasons. Advanced machine learning algorithms are now utilized to ingest vast genomic datasets, enabling breeders to predict complex phenotypic traits and identify optimal parent combinations without the need for extensive field trials. This technological evolution allows research entities to bypass traditional bottlenecks, significantly compressing the time required to bring novel varieties to market. According to Bayer, December 2024, in the 'A look at how AI is rewriting crop genetics' article, the integration of new AI capabilities has enabled the reduction of breeding cycles by up to 15 times and cut overall product development timelines by two years.

The Transition to High-Throughput Next-Generation Sequencing (NGS) Platforms is simultaneously solidifying its position as the industry standard for decoding complex plant genomes at an industrial scale. Unlike legacy microarray methods, NGS systems provide the deep resolution necessary to detect rare variants and structural changes across diverse germplasm, a capability that is essential for modern commercial agriculture's high-volume data demands. This systemic reliance on advanced sequencing architecture is evidenced by the sustained financial performance of leading technology providers who underpin the global research ecosystem. According to Illumina, February 2025, in the 'Financial Results for Fourth Quarter and Fiscal Year 2024' report, the company achieved a full-year revenue of $4.3 billion, highlighting the substantial and ongoing market demand for sequencing technologies despite broader economic fluctuations.

Segmental Insights

The SNP Genotyping Equipment segment is characterized as the fastest-growing category within the Global Plant Genotyping Equipment Market, driven by the escalating necessity for high-throughput genetic screening in modern agriculture. This rapid expansion is primarily attributed to the technology's superior scalability and cost-efficiency, which enables the simultaneous analysis of thousands of genetic markers with exceptional precision. Unlike legacy methods, SNP genotyping significantly accelerates Marker-Assisted Selection, allowing agricultural research institutions and commercial seed enterprises to efficiently identify complex traits such as drought tolerance and disease resistance. Consequently, the adoption of these systems is surging as the industry prioritizes the rapid development of climate-resilient and high-yield crop varieties to ensure global food security.

Regional Insights

North America maintains a leading position in the Global Plant Genotyping Equipment Market, driven by the widespread implementation of genomic technologies in agriculture. The region benefits from established infrastructure for molecular breeding and substantial federal funding for research. Institutions such as the United States Department of Agriculture (USDA) actively support initiatives to enhance crop resilience, which fuels the demand for genotyping instruments. Furthermore, the concentration of major biotechnology corporations in the United States accelerates the commercialization of genomic applications, ensuring continuous market growth and the integration of precision agriculture practices.

Recent Developments

• In September 2024, Illumina and LGC Biosearch Technologies announced a strategic partnership to accelerate the adoption of genomics in agricultural breeding and research. The collaboration combines the genomics leader's scalable sequencing platforms with the partner's targeted genotyping-by-sequencing (Amp-Seq) technology to deliver efficient and affordable solutions for the Asia Pacific and Latin America regions. This joint effort aims to support plant and animal breeders in developing improved crop varieties and livestock by providing accessible tools for high-throughput genomic characterization and marker-assisted selection.
• In June 2024, MGI Tech launched a comprehensive workflow solution for agricultural large-scale low-pass whole genome sequencing at the International Plant and Animal Genome Conference Asia. The new automated product portfolio covers the entire process from sample extraction and library preparation to sequencing and data analysis, specifically tailored for the molecular breeding of diploid agricultural species. This innovation utilizes the company's proprietary sequencing platforms to address the need for flexible, high-throughput, and cost-effective genotyping tools in the global agriculture industry.
• In April 2024, Eurofins Genomics AgriGenomics Europe entered into a partnership with Gencove to introduce a complete low-pass whole genome sequencing (lpWGS) solution for the European agrigenomics sector. This collaboration integrates the service provider's extensive sequencing capabilities with advanced analytics software to offer a high-throughput, cost-efficient genotyping method. The new solution is designed to replace traditional microarray technologies, enabling breeders and researchers to obtain more data-rich genomic insights for identifying complex traits and improving crop varieties.
• In January 2024, Complete Genomics and Gencove announced a strategic partnership to offer a bundled solution for low-pass whole genome sequencing (lpWGS) aimed at the agricultural market. The collaboration combines the equipment manufacturer's high-capacity sequencing platforms with the software provider's analysis and imputation tools to deliver a cost-effective alternative to genotyping arrays. This joint solution allows researchers and breeders in the plant and animal sectors to access comprehensive genomic data with higher throughput and lower costs, facilitating large-scale molecular breeding and population genetics studies.

Key Market Players

• AgBiome LLC
• Agilent Technologies Inc.
• AUM LifeTech, Inc.
• BGI Genomics
• Biome Makers Spain Inc.
• Eurofins Scientific
• Evogene Ltd.
• Illumina, Inc.
• LGC Limited
• Merck KgaA

By Equipment	By Application	By Region
SNP Genotyping Equipment DNA Analyzer Real Time PCR Instrument Liquid Handler Others	Quality Assessment Product Development Breeding Plant Research Others	North America Europe Asia Pacific South America Middle East & Africa

Report Scope:

In this report, the Global Plant Genotyping Equipment Market has been segmented into the following categories, in addition to the industry trends which have also been detailed below:

• Plant Genotyping Equipment Market, By Equipment:

• SNP Genotyping Equipment
• DNA Analyzer
• Real Time PCR Instrument
• Liquid Handler
• Others

• Plant Genotyping Equipment Market, By Application:

• Quality Assessment
• Product Development
• Breeding
• Plant Research
• Others

• Plant Genotyping Equipment Market, By Region:

• North America
• United States
• Canada
• Mexico
• Europe
• France
• United Kingdom
• Italy
• Germany
• Spain
• Asia Pacific
• China
• India
• Japan
• Australia
• South Korea
• South America
• Brazil
• Argentina
• Colombia
• Middle East & Africa
• South Africa
• Saudi Arabia
• UAE