Next Generation Sequencing (NGS) in Agrigenomics Market - Global Industry Size, Share, Trends, Opportunity, and Forecast, Segmented By Product (Kits & Consumables, Instruments, Others), By Technique (DNA Extraction & Purification, DNA/RNA Sequencing, Genotyping, Marker Assistance Selection, Others), By Application (Crops and Livestock), By Region and Competition, 2021-2031F

Forecast Period	2027-2031
Market Size (2025)	USD 2.99 Billion
CAGR (2026-2031)	7.29%
Fastest Growing Segment	Kits & Consumables
Largest Market	North America
Market Size (2031)	USD 4.56 Billion

Market Overview

The Global Next Generation Sequencing (NGS) in Agrigenomics Market will grow from USD 2.99 Billion in 2025 to USD 4.56 Billion by 2031 at a 7.29% CAGR. Next Generation Sequencing (NGS) in agrigenomics is defined as the application of high-throughput DNA sequencing technologies to agricultural research for analyzing the genomes of crops and livestock to enhance productivity and resilience. The primary drivers propelling this market include the escalating global demand for food security, the urgent necessity for climate-resilient crop varieties, and the substantial reduction in sequencing costs which facilitates the broader adoption of genomic selection. This reliance on advanced genetic technologies is reflected in industry sentiment; according to the International Seed Federation, in 2024, more than 90 percent of surveyed seed sector experts expected new plant breeding breakthroughs to accelerate the development of improved crop varieties in the near future.

Despite these strong growth factors, the market faces a significant challenge in the form of inconsistent and stringent regulatory frameworks governing the use of genomic data and gene-edited products. Divergent international policies can delay the commercialization of improved varieties and increase compliance costs, creating barriers to entry for smaller entities. Additionally, the massive volume of data generated by modern sequencing platforms creates a bioinformatics bottleneck, requiring sophisticated computational infrastructure and expertise that limits rapid scalability for some market participants.

Key Market Drivers

Increasing government funding for agricultural biotechnology research is a primary catalyst for the Global Next Generation Sequencing (NGS) in Agrigenomics Market, providing essential capital to de-risk genomic tool development. Public investment allows institutions to undertake large-scale sequencing projects that private enterprises might deem too speculative, particularly in animal health and biodiversity conservation. This financial support translates into advanced breeding programs utilizing NGS for pathogen detection and trait improvement. For instance, according to the USDA National Institute of Food and Agriculture, in January 2026, the agency invested $2.8 million in research projects targeting animal breeding and genomics. Such funding advances scientific understanding and subsidizes the infrastructural costs of high-throughput sequencing, lowering entry barriers for market participants.

Technological advancements in high-throughput sequencing platforms are also driving expansion by enabling the rapid analysis of complex genomes for sustainable food production. Major corporations are investing heavily to integrate genomic data with digital farming solutions, enhancing crop resilience against climate change. According to Bayer, in February 2025, the company reported a Research and Development investment of €2.6 billion within its Crop Science division for the 2024 fiscal year, underscoring the massive industrial commitment to innovation. This corporate drive is supported by a maturing regulatory environment; according to Euroseeds, in January 2025, nearly 300 regulatory decisions globally had confirmed the conventional status of New Genomic Technique plants by the end of 2024. These factors foster an ecosystem where advanced sequencing can be commercially scaled.

Download Free Sample Report

Key Market Challenges

Inconsistent and stringent regulatory frameworks significantly impede the expansion of the Global Next Generation Sequencing (NGS) in Agrigenomics Market by creating substantial barriers to the commercialization of genomic innovations. While NGS technologies accelerate the identification of beneficial traits, the subsequent development of gene-edited crops often stalls due to complex and divergent approval processes across different jurisdictions. These regulatory hurdles necessitate extensive and costly safety assessments, which can negate the financial advantages gained from reduced sequencing costs. Consequently, companies face prolonged timelines for bringing improved varieties to market, directly affecting their return on investment and stifling the rapid deployment of climate-resilient crops.

This regulatory uncertainty acts as a major deterrent to market growth. According to the International Seed Federation, in 2024, approximately one-third of the global seed sector identified the implementation of predictable and science-based regulations as the most critical factor for unlocking further innovation. This data reflects the industry's struggle with the current patchwork of international policies, which delays the introduction of new products and disproportionately affects smaller entities. By forcing market participants to allocate significant capital towards regulatory compliance rather than research, these frameworks effectively limit the market's potential scalability and dynamism.

Key Market Trends

The widespread adoption of third-generation long-read sequencing is fundamentally reshaping the analysis of complex plant genomes by resolving the assembly limitations inherent in short-read technologies. Agrigenomic researchers are increasingly deploying these platforms to decipher highly repetitive regions and structural variants in polyploid crops like wheat and sugarcane, facilitating the creation of gap-free, platinum-quality reference genomes essential for trait discovery. This surge in high-fidelity application is evidenced by increased consumables usage; according to Pacific Biosciences, November 2025, in the 'Third Quarter 2025 Financial Results', the company reported record consumable revenue of $21.3 million, driven by the sustained operational demand for its long-read sequencing systems.

Simultaneously, the proliferation of low-coverage whole genome sequencing for high-throughput genotyping is displacing traditional microarray-based screening methods in large-scale breeding programs. This approach allows organizations to characterize vast germplasm banks and mapping populations by sequencing at lower depths and utilizing imputation algorithms to infer missing genotypes, thereby drastically lowering the cost per data point. The scalability of this trend is illustrating a new era of industrial genomics; according to Oxford Nanopore Technologies, March 2025, in the 'From pandemic preparedness to planetary biodiversity' presentation, new workflows enable the simultaneous sequencing of up to 100,000 samples at a cost of approximately one cent per specimen, significantly expanding the potential for biodiversity and trait analysis.

Segmental Insights

The Kits and Consumables segment is positioned as the fastest-growing category within the Global Next Generation Sequencing in Agrigenomics Market. This growth is primarily driven by the recurring demand for reagents, flow cells, and library preparation materials required for continuous workflow operations. Unlike sequencing instruments which represent one-time capital investments, consumables are essential for every individual test run. As agricultural biotechnology firms and research centers intensify their use of genomic selection and marker-assisted breeding to improve crop resilience, the frequency of sequencing runs increases, thereby sustaining a high volume of procurement for these essential operational components.

Regional Insights

North America holds the leading position in the global Next Generation Sequencing (NGS) in agrigenomics market, primarily driven by established biotechnology infrastructure and high adoption rates of genomic technologies. This dominance is supported by continuous funding for agricultural research and development from government entities. Specifically, the United States Department of Agriculture (USDA) actively finances genomic projects aimed at improving crop resilience and livestock quality. Additionally, the strong presence of major industry participants headquartered in the region facilitates the rapid integration of sequencing tools into commercial farming practices, ensuring sustained market leadership.

Recent Developments

• In December 2024, KeyGene and Annogen announced the successful results of their joint research utilizing the SuRE platform to identify beneficial genetic variants in crops. This collaboration applied advanced functional genomics technology to systematically screen for non-coding sequence variants that upregulate important agricultural traits, such as disease resistance and yield. The study successfully identified specific promoter variants in tomatoes that enhanced the expression of genes related to biotic stress and wounding responses. These findings demonstrated the efficacy of high-throughput functional screening in plant genomes, providing breeders with a powerful new method to generate and select gain-of-function variants for crop improvement.
• In November 2024, Computomics announced a strategic collaboration with Starke Ayres, a leading independent vegetable seed company, to advance crop breeding programs using artificial intelligence and genomics. The partnership focused on integrating Computomics' climate-smart breeding technology with the seed company's extensive breeding expertise to develop high-performing vegetable varieties. By applying predictive analytics to large-scale genomic and environmental data, the collaboration aimed to model complex genotype-by-environment interactions. This data-driven approach was intended to accelerate the selection of climate-resilient crops, ensuring higher yields and better adaptability to changing growing conditions, thereby supporting sustainable global food production.
• In April 2024, Neogen Corporation entered into a significant genomics relationship with Performance Food Group to advance transparency and traceability in the food supply chain. Through this collaboration, Neogen became the official genomics provider for the partner's PathProven program, utilizing its world-class DNA testing and genomic capabilities to verify the origin and quality of protein products. This initiative integrated advanced genomic technology into the sourcing process, allowing for the precise tracking of food products from farm to fork. The partnership underscored the growing importance of genomic verification in ensuring food security, improving supply chain efficiency, and meeting consumer demand for high-quality, traceable agricultural products.
• In March 2024, Eurofins Genomics Agrigenomics and MGI Tech established a strategic partnership to enhance the accessibility and affordability of next-generation sequencing within the global agrigenomics market. This collaboration aimed to democratize access to high-throughput sequencing technologies for agricultural applications, specifically focusing on livestock and crop improvements. By leveraging MGI’s ultra-high-throughput DNBSEQ sequencing platforms, Eurofins Genomics intended to offer cost-effective whole genome sequencing and low-pass sequencing services. The agreement was designed to empower breeders and researchers with advanced genomic tools to accelerate genetic progress and support sustainable agriculture through precise genotyping and variant discovery.

Key Market Players

• 10x Genomics, Inc.
• Agrigenomics Inc.
• Daicel Arbor Biosciences
• Biogenetic Services Inc.
• Eurofins Scientific SE
• GALSEQ S.r.l.
• Illumina, Inc.
• Genome Life Sciences Private Limited
• NuGen Technologies Inc.

By Product	By Technique	By Application	By Region
Kits & Consumables Instruments Others	DNA Extraction & Purification DNA/RNA Sequencing Genotyping Marker Assistance Selection Others	Crops and Livestock	North America Europe Asia Pacific South America Middle East & Africa

Report Scope:

In this report, the Global Next Generation Sequencing (NGS) in Agrigenomics Market has been segmented into the following categories, in addition to the industry trends which have also been detailed below:

• Next Generation Sequencing (NGS) in Agrigenomics Market, By Product:

• Kits & Consumables
• Instruments
• Others

• Next Generation Sequencing (NGS) in Agrigenomics Market, By Technique:

• DNA Extraction & Purification
• DNA/RNA Sequencing
• Genotyping
• Marker Assistance Selection
• Others

• Next Generation Sequencing (NGS) in Agrigenomics Market, By Application:

• Crops and Livestock

• Next Generation Sequencing (NGS) in Agrigenomics Market, By Region:

• North America
• United States
• Canada
• Mexico
• Europe
• France
• United Kingdom
• Italy
• Germany
• Spain
• Asia Pacific
• China
• India
• Japan
• Australia
• South Korea
• South America
• Brazil
• Argentina
• Colombia
• Middle East & Africa
• South Africa
• Saudi Arabia
• UAE